Dr. Itai Sharon : Micrioinformatics

Microbial rhodopsins on leaf surfaces of terrestrial plants

Atamna-Ismaeel, N., Finkel, O.M., Glaser, F., Sharon, I., Schneider, R., Post, A.F., Spudich, J.L., von Mering, C., Vorholt, J.A., Iluz, D., Béjà, O., Belkin, S
2011 , Environ Microbiol 2011 Volume 14 Issue 1 Pages 140-146

Reconstructing a puzzle: Existence of cyanophages containing both photosystem-I & photosystem- II gene-suites inferred from oceanic metagenomic datasets

Alperovitch A., Sharon I., Rohwer F., Aro E.M., Milo R., Nelson N., Béjà, O.
2011 , Environ Microbiol. 2011 Volume 13 Pages 24-32

Comparative metagenomics of microbial traits within oceanic viral communities

Sharon, I., Battchikova, N., Aro, E.-M., Giglione, C., Meinnel, T., Glaser, F., Pinter, R.Y., Breitbart, M., Rohwer, F., Béjà, O
2011 , ISME J 2011 Volume 5 Issue 7 Pages 1178-1190

Comparative community genomics in the Dead Sea, an increasingly extreme environment

Bodaker I., Sharon I., Suzuki M.T., Feingersch R., Shmoish M., Andreishcheva E., Sogin M.L., Rosenber M., Maguire M.E., Belkin S., Oren O., Béjà O.
2010 , ISME J 2010 Volume 4 Issue 3 Pages 399- 407

Pathway-based functional analysis of metagenomes

Sharon I., Bercovici S., Pinter R., Shlomi T.
2010 , J Comput Biol 2010 Volume 18 Issue 3 Pages 495-505

A statistical framework for the functional analysis of metagenomes

Sharon, I., Pati, A., Markowitz, V.M., Pinter, R.Y.
2009 , Computational Molecular Biology Proceedings of 13th Annual International Conference on Research in (RECOMB), LNCS 2009 Volume 5541 Pages 496-511

Microbial community genomics in eastern Mediterranean Sea surface waters

Feingersch, R., Suzuki, M.T., Shmoish, M., Sharon, I., Sabehi, G., Partensky, F., Béjà, O.
2009 , ISME J. 2009 Volume 4 Issue 1 Pages 78-87

Photosystem I gene cassettes are present in marine virus genomes

Sharon I., Alperovitch A., Rohwer F., Haynes M., Glaser F., Atamna-Ismaeel N., Pinter R.Y., Partensky F., Koonin E.V., Wolf Y.I., Nelson N., Béjà O.
2009 , Nature 2009 Volume 461 Pages 258-262

Prediction of protein-protein Interactions: a study on the co-evolution model.

Sharon, I., Davis, J.V. and Yona, G.
2009 , In Methods Mol Biol: Computational Systems Biology ,2009, Ed. ,Springer-Verlag , Pages 61-88

Reverse dissimilatory sulfite reductase as phylogenetic marker for a subgroup of sulfur-oxidizing prokaryotes

Loy, A., Duller, S., Baranyi, C., Mußmann, M., Ott, J., Sharon, I., Béjà, O., Le Paslier, D., Dahl, C., Wagner, M.
2008 , Environ Microbiol. 2008 Volume 11 Issue 2 Pages 289-299

The tryptophan pathway genes of the Sargasso Sea metagenome: new operon structure

Kagan, J., Sharon, I., Béjà, O., Kuhn, J.
2008 , Genome Biol 2008 Volume 9 Issue 1 Pages R20

Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems

Atamna-Ismaeel, N., Sabehi, G., Sharon, I., Witzel, K-P., Labrenz, M., Jurgens, K., Barkay, T., Stomp, M., Huisman, J., Béjà, O.
2008 , ISME J 2008 Volume 2 Issue 6 Pages 656-662

Viral photosynthetic reaction center genes and transcripts in the marine environment

Sharon, I.*, Tzahor, S.*, Williamson, S.*, Shmoish, M., Man-Aharonovich, D., Rusch, D.B., Yooseph, S., Zeidner, G., Golden, S.S., Mackey, S.R., Adir, N., Weingart, U., Horn, D., Venter, J.C., Mandel-Gutfreund, Y., Béjà, O.
2007 , ISME J 2007 Volume 1 Issue 6 Pages 492-501

Correcting BLAST e-values for low-complexity segments

Sharon, I., Birkland, A., Chang, K., El-Yaniv, R., Yona, G.
2006 , J Comput Biol 2006 Volume 12 Issue 7 Pages 978-1001