Bioenergy and Protein Design
- Bioenergy and Protein Design
- Bioenergy and Protein Design
Professor Dror Noy
Protection of Oxygen-Sensitive Enzymes by Peptide Hydrogel
Oren Ben-Zvi, Itzhak Grinberg, Asuka A. Orr, Dror Noy, Phanourios Tamamis, Iftach Yacoby, Lihi Adler-Abramovich
ACS Nano
2021
Direct Assembly in Aqueous Solutions of Stable Chlorophyllide Complexes with Type II Water‐soluble Chlorophyll Proteins
Dominika Bednarczyk, Chen Tor‐Cohen, Prabir Kumar Das, Dror Noy
Photochemistry and Photobiology
2021
The amphibian antimicrobial peptide uperin 3.5 is a cross-α/cross-β chameleon functional amyloid
Nir Salinas, Einav Tayeb-Fligelman, Massimo D. Sammito, Daniel Bloch, Raz Jelinek, Dror Noy, Isabel Usón, Meytal Landau
Proceedings of the National Academy of Sciences, 118 (3) e2014442118
2021
Spectral tuning of chlorophylls in proteins – electrostatics vs. ring deformation
Yigal Lahav, Dror Noy, Igor Schapiro
Physical Chemistry Chemical Physics, 23, 6544-6551
2021
The phycobilisome core‐membrane linkers from Synechocystis sp. PCC 6803 and red‐algae assemble in the same topology
Nan‐Nan Niu, Lu Lu , Pan‐Pan Peng, Zhi‐Juan Fu, Dan Miao, Ming Zhou, Dror Noy, Kai‐Hong Zhao
The Plant Journal
2021
In Vivo Biogenesis of a De Novo Designed Iron–Sulfur Protein
Bhanu P. Jagilinki, Stefan Ilic, Cristian Trncik, Alexei M. Tyryshkin, Douglas H. Pike, Wolfgang Lubitz, Eckhard Bill, Oliver Einsle, James A. Birrell, Barak Akabayov, Dror Noy, Vikas Nanda
ACS Synthetic Biology, 9(12), 3400–3407
2020
New homologues of Brassicaceae water-soluble chlorophyll proteins shed light on chlorophyll binding, spectral tuning and molecular evolution.
Prabahar, V., Jurnou, L. A., Paluy, I., Peleg, Y., & Noy, D.
Febs Journal, 287(5), 991-1004
2019
Solving Structures of Pigment-Protein Complexes as Inverse Optimization Problems using Decomposition.
Lahav, Y., Shir, O.M., Noy, D.
Proceedings of the Genetic and Evolutionary Computation Conference, GECCO-2017, Ed. ACM Press New York, NY, USA, 1169-1176
2017
Inside Back Cover: Fine Tuning of Chlorophyll Spectra by Protein-Induced Ring Deformation
Bednarczyk, D., Dym, O., Prabahar, V., Peleg, Y., Pike, D. H., & Noy, D.
Angewandte Chemie International Edition, 55(24) 7007-7007
2016
New Insight into the Water-Soluble Chlorophyll-Binding Protein from Lepidium virginicum
Kell, A., Bednarczyk, D., Acharya, K., Chen, J., Noy, D., & Jankowiak, R
Photochemistry and Photobiology, 92(3), 428-435
2016
Structural principles for computational and de novo design of 4Fe-4S metalloproteins.
Nanda, V., Senn, S., Pike, D. H., Rodriguez-Granillo, A., Hansen, W. A., Khare, S. D., & Noy, D
Biochimica et Biophysica Acta-Bioenergentics, 1857(5) 531-538
2016
Water in Oil Emulsions: A New System for Assembling Water-soluble Chlorophyll-binding Proteins with Hydrophobic Pigments
Bednarczyk, D., & Noy, D.
Journal of Visualized Experiments, 109, e53410
2016
Fine Tuning of Chlorophyll Spectra by Protein-Induced Ring Deformation
Bednarczyk, D., Dym, O., Prabahar, V., Peleg, Y., Pike, D. H., & Noy, D
Angewandte Chemie International Edition, 55(24), 6901-6905
2016
Assembly of water-soluble chlorophyll-binding proteins with native hydrophobic chlorophylls in water-in-oil emulsions
Bednarczyk, D., Takahashi, S., Satoh, H., Noy, D
Biochimica et Biophysica Acta-Bioenergentics, 1847(3), 307-313
2015
The role of charge-transfer states in energy transfer and dissipation within natural and artificial bacteriochlorophyll proteins
Wahadoszamen, M., Margalit, I., Ara, A. M., van Grondelle, R., Noy, D
Nature Communications, 5, 5287
2014
Accelerated electron transport from photosystem i to redox partners by covalently linked ferredoxin
G. Wittenberg; W. Sheffler; D. Darchi; D. Baker; D. Noy
Physical Chemistry Chemical Physics 2013 Volume 15 Issue 45 Pages 19608-19614
2013
Bimodal intramolecular excitation energy transfer in a multichromophore photosynthetic model system: Hybrid fusion proteins comprising natural phycobilin- and artificial chlorophyll-binding domains
X. L. Zeng; K. Tang; N. Zhou; M. Zhou; H. J. M. Hou; H. Scheer; K. H. Zhao; D. Noy
Journal of the American Chemical Society 2013 Volume 135 Issue 36 Pages 13479-13487
2013
Empirical and computational design of iron-sulfur cluster proteins
J. Grzyb; F. Xu; V. Nanda; R. Åuczkowska; E. Reijerse; W. Lubitz; D. Noy
Biochimica et Biophysica Acta - Bioenergetics 2012 Volume 1817 Issue 8 Pages 1256-1262
2012
A minimal phycobilisome: Fusion and chromophorylation of the truncated core-membrane linker and phycocyanin
K. Tang; X. L. Zeng; Y. Yang; Z. B. Wang; X. J. Wu; M. Zhou; D. Noy; H. Scheer; K. H. Zhao
Biochimica et Biophysica Acta - Bioenergetics 2012 Volume 1817 Issue 7 Pages 1030-1036
2012
Design principles for chlorophyll-binding sites in helical proteins
P. Braun; E. Goldberg; C. Negron; M. Von Jan; F. Xu; V. Nanda; R. L. Koder; D. Noy
Proteins: Structure, Function and Bioinformatics 2011 Volume 79 Issue 2 Pages 463-476
2011
Electron transport between photosystem ii and photosystem i encapsulated in sol-gel glasses
F. Kopnov; I. Cohen-Ofri; D. Noy
Angewandte Chemie - International Edition 2011 Volume 50 Issue 51 Pages 12347-12350
2011
Zinc-bacteriochlorophyllide dimers in de novo designed four-helix bundle proteins. A model system for natural light energy harvesting and dissipation
I. Cohen-Ofri; M. Van Gastel; J. Grzyb; A. Brandis; I. Pinkas; W. Lubitz; D. Noy
Journal of the American Chemical Society 2011 Volume 133 Issue 24 Pages 9526-9535
2011
De novo design of a non-natural fold for an iron-sulfur protein: Alpha-helical coiled-coil with a four-iron four-sulfur cluster binding site in its central core
J. Grzyb; F. Xu; L. Weiner; E. J. Reijerse; W. Lubitz; V. Nanda; D. Noy
Biochimica et Biophysica Acta - Bioenergetics 2010 Volume 1797 Issue 3 Pages 406-413
2010
De Novo Designed Bacteriochlorophyll-Binding Helix-Bundle Proteins
W. Haehnel; D. Noy; H. Scheer
In The Purple Phototrophic Bacteria ,2008, C. N. Hunter; F. Daldal; M. C. Thurnauer; J. T. Beatty Ed. ,Springer Dorderecht, Pages 895-912
2008
Natural photosystems from an engineer's perspective: Length, time, and energy scales of charge and energy transfer
D. Noy
Photosynthesis Research 2008 Volume 95 Issue 1 Pages 23-35
2008